BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C03SP1|AL429871
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1486 1686 0.0
>3x_Contig1486
Length = 12131
Score = 1686 bits (849), Expect = 0.0
Identities = 860/864 (99%), Gaps = 1/864 (0%)
Strand = Plus / Plus
Query: 1 tcatcttgggggttcaaaactccacctatctctgttacgtcaataaccgaagtaccggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5351 tcatcttgggggttcaaaactccacctatctctgttacgtcaataaccgaagtaccggac 5410
Query: 61 gcttggagatgtacaatattggaacaggtagtctctaagaatggctcaaacatagttaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5411 gcttggagatgtacaatattggaacaggtagtctctaagaatggctcaaacatagttaca 5470
Query: 121 gcattaattaatggccttgtgactaattttgacagtagagctcaccaggaaatwatcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5471 gcattaattaatggccttgtgactaattttgacagtagagctcaccaggaaattatcagt 5530
Query: 181 ttaattgtaaaaatattcagattggctacagaaaacaataacaatgatccatctgtttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5531 ttaattgtaaaaatattcagattggctacagaaaacaataacaatgatccatctgtttgc 5590
Query: 241 ttagaatggttagactctgctttgagaaaaatgggaactattgaatctaacgaacgtagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5591 ttagaatggttagactctgctttgagaaaaatgggaactattgaatctaacgaacgtagc 5650
Query: 301 aaactaatgagcatcggtaatgcattaatacagagggattatagacgttgcaggggtaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5651 aaactaatgagcatcggtaatgcattaatacagagggattatagacgttgcaggggtaat 5710
Query: 361 atcaaggatttcatcgattggtatttaaggaaacacatttcttcaagaatgtacacataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5711 atcaaggatttcatcgattggtatttaaggaaacacatttcttcaagaatgtacacataa 5770
Query: 421 agtcaggaaagagtacgctttgaaaaataagatctaattcacaatattcgcttatgattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5771 agtcaggaaagagtacgctttgaaaaataagatctaattcacaatattcgcttatgattc 5830
Query: 481 atgatgaaactttgtctgattccttttatttcattagtgaaacgntaaataatatataag 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5831 atgatgaaactttgtctgattccttttatttcattagtgaaacggtaaataatatataag 5890
Query: 541 tattgtcaaattgattaatagtattaattgaaagttattagtcataaaagtagaggttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5891 tattgtcaaattgattaatagtattaattgaaagttattagtcataaaagtagaggttat 5950
Query: 601 agggaaactgcaacagcgacatacttaaaaaataaaagttttaaacgttctggtgagaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5951 agggaaactgcaacagcgacatacttaaaaaataaaagttttaaacgttctggtgagaaa 6010
Query: 661 gtttctttaagacttcaggatatgccctgaagatttcgtcgaatctttctgggtaagata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6011 gtttctttaagacttcaggatatgccctgaagatttcgtcgaatctttctgggtaagata 6070
Query: 721 ggtggaaaacttccggatcattacccaatgcaacgaagaaggtagcagttccggatctga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6071 ggtggaaaacttccggatcattacccaatgcaacgaagaaggtagcagttccggatctga 6130
Query: 781 tggtctctgtaatcacgttgcaaatttccatagcaatgacg-argcgaatgccatcaagg 839
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 6131 tggtctctgtaatcacgttgcaaatttccatagcaatgacgaaggcgaatgccatcaagg 6190
Query: 840 ctggtgtaaagttgttgttgtcat 863
||||||||||||||||||||||||
Sbjct: 6191 ctggtgtaaagttgttgttgtcat 6214
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7341
Number of Sequences: 1807
Number of extensions: 7341
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)